Tumor Evolution and Phylogeny

Cancer arises through the gradual accumulation of somatic alterations within epithelial tissues. Yet tumorigenesis is not solely a process of cell-intrinsic genetic change. It unfolds within a dynamic tissue ecosystem in which immune surveillance, inflammation, and microenvironmental signals continuously shape clonal expansion and elimination. While both epithelial evolution and tumor–immune interactions have been studied intensively, they are rarely reconstructed jointly across the full trajectory from normal tissue to invasive cancer. As a result, we lack a quantitative understanding of how phases of epithelial expansion coincide with distinct immune contexts, and how their joint dynamics influence cancer risk and progression.

H2CE addresses this gap by integrating high-resolution reconstruction of epithelial lineage relationships and proliferative history with comprehensive immune profiling. Building on complementary expertise at Harvard Medical School and Heidelberg University Hospital, we establish a transatlantic platform capable of jointly decoding epithelial–immune co-evolution in human tissues.

Cooperation partners

Kamila Naxerova
Kamila NaxerovaAssoc. Professor, PhD

Publications / Output

Blohmer M, Cheek D, Hung W, Kessler M, Chatzidimitriou F, Wang J, Hung W, Lee I, Gorelick AN, Wassenaar EC, Yang C, Yeh Y, Ho H, Speiser D, Karsten MM, Lanuti M, Pai SI, Kranenburg O, Lennerz JK, Chou T, Kloor M, Naxerova M. Quantifying cell divisions along evolutionary lineages in cancerNat Genet. 2025 Mar;57(3):706-717. doi: 10.1038/s41588-025-02078-5. Epub 2025 Feb 4.

von Knebel Doeberitz M, Kloor M. Towards a vaccine to prevent cancer in Lynch syndrome patients.Fam Cancer. 2013 Jun;12(2):307-12. doi: 10.1007/s10689-013-9662-7. Review. PMID: 23760517

Reuschenbach M, Kloor M, Morak M, Wentzensen N, Germann A, Garbe Y, Tariverdian M, Findeisen P, Neumaier M, Holinski-Feder E, von Knebel Doeberitz M. Serum antibodies against frameshift peptides in microsatellite unstable colorectal cancer patients with Lynch syndrome.Fam Cancer. 2010 Jun;9(2):173-9. PMID: 19957108

Schwitalle Y, Kloor M, Eiermann S, Linnebacher M, Kienle P, Knaebel HP, Tariverdian M, Benner A, von Knebel Doeberitz M. Immune response against frameshift-induced neopeptides in HNPCC patients and healthy HNPCC mutation carriers. 2008 Apr;134(4):988-97. PMID: 18395080

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